PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_001699-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 207aa    MW: 22900.5 Da    PI: 7.0473
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_001699-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-1050100155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r+  +++Er RR ++   +++L++++P++      K + + i e+++ YIk+L+
  NNU_001699-RA  50 KRKPSPQIERDRRVQMSGLYATLQSMIPNL----LHKATRVKIIEETIAYIKELE 100
                    5777899**********************5....48****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.06E-74897No hitNo description
PROSITE profilePS5088813.0334999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-1249114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.29E-1249120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-750100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-655105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.5E-4141204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MEGNHEDKDV SKLLLKLMEG YSDAAIAPLS EFSPSKEITI NAEAASCSRK RKPSPQIERD  60
RRVQMSGLYA TLQSMIPNLL HKATRVKIIE ETIAYIKELE ECLEELKRRK AAAIRALRLC  120
NHPNASSSVD VTVSGNVAFF EVSAMVRRGL VKEIFGVFDK HRVEVLAAGV AVHELELRLT  180
VTALIDGNGD DVGAAERIKT DLLTLLF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245381.15e-77PREDICTED: uncharacterized protein LOC104588941
TrEMBLA0A061EPZ08e-47A0A061EPZ0_THECC; Uncharacterized protein